BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009C10SP1|AL426011
(798 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1589 1579 0.0
>3x_Contig1589
Length = 10239
Score = 1579 bits (796), Expect = 0.0
Identities = 797/798 (99%)
Strand = Plus / Minus
Query: 1 atcttcttttcagcaacagtggttaaaaatgcttcgttaattttcaattcatcagtgtag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5264 atcttcttttcagcaacagtggttaaaaatgcttcgttaattttcaattcatcagtgtag 5205
Query: 61 aacttcttatcctttaaatccttatcaaccaaagagctcttcaccaatacaatgatggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5204 aacttcttatcctttaaatccttatcaaccaaagagctcttcaccaatacaatgatggaa 5145
Query: 121 ccttcttgcttcacagtggaagctacgtcataagcatttaaaatggaaatgtcttcgaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5144 ccttcttgcttcacagtggaagctacgtcataagcatttaaaatggaaatgtcttcgaca 5085
Query: 181 acaatcacatcggcagagtcgatattagaaacaacacttttcgactttgatggatgcgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5084 acaatcacatcggcagagtcgatattagaaacaacacttttcgactttgatggatgcgaa 5025
Query: 241 gtgaactgtgcttggaaggtacctgcattcccaatgttgtcaaatttcgttctcaaggaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5024 gtgaactgtgcttggaaggtacctgcattcccaatgttgtcaaatttcgttctcaaggaa 4965
Query: 301 atatcaacattatcgatcaatgatagaccttgtactaatctagcagccaaatccaaatta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4964 atatcaacattatcgatcaatgatagaccttgtactaatctagcagccaaatccaaatta 4905
Query: 361 ttactgttgtcagtggtccagtaaatgaagttttgggaattacttgatatctccaattcg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4904 ttactgttgtcagtggtccagtaaatgaagttttgggaattacttgatatctccaattcg 4845
Query: 421 aaacttgggatgaaactagtaacaatttgcttaacagcctttggggaccaaacaaagttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4844 aaacttgggatgaaactagtaacaatttgcttaacagcctttggggaccaaacaaagttt 4785
Query: 481 ggctgatagatgtactcggcaatggttaaagttctcttgttgtggaagaataacgcacct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4784 ggctgatagatgtactcggcaatggttaaagttctcttgttgtggaagaataacgcacct 4725
Query: 541 gaaacctgagatctcaaccaggatggagactggccagttagagattggccaattacgaca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4724 gaaacctgagatctcaaccaggatggagactggccagttagagattggccaattacgaca 4665
Query: 601 attttcttaacagtagtaggaatcaaagaaacaaatttctcagtgtcaaatggcaatggg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4664 attttcttaacagtagtaggaatcaaagaaacaaatttctcagtgtcaaatggcaatggg 4605
Query: 661 attctaacagcaagtacgccgaccttagagccactttgattcaatagagaagcaaaaagt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4604 attctaacagcaagtacgccgaccttagagccactttgattcaatagagaagcaaaaagt 4545
Query: 721 tcggtctccaaagaaccataagtwatgaaaatagtttcagcagactcattaccgtaatat 780
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 4544 tcggtctccaaagaaccataagtaatgaaaatagtttcagcagactcattaccgtaatat 4485
Query: 781 tggaagttgtgcagtctc 798
||||||||||||||||||
Sbjct: 4484 tggaagttgtgcagtctc 4467
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6690
Number of Sequences: 1807
Number of extensions: 6690
Number of successful extensions: 26
Number of sequences better than 1.0e-20: 1
length of query: 798
length of database: 10,358,551
effective HSP length: 16
effective length of query: 782
effective length of database: 10,329,639
effective search space: 8077777698
effective search space used: 8077777698
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)